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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16287041_16288688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16287041 - 16288688

Intron Length:

1648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTAAAAATAATA

Flanking Amino Acid:

TIRGIITLGRGKLLRGFDPV

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

79.1

0.65

0.9

72.8

37.2

Minor 5ss

26.7

-2.7

3.3

37.5

47.2

Minor BPS

45.4

-0.3

60.87

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043468

16283074 - 16301658

18585

ENSAPLT00000008372

16282819 - 16300658

17840