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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16288793_16290814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16288793 - 16290814

Intron Length:

2022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTGTCCATATTT

Flanking Amino Acid:

LPFHMVFDKELRVKQAGVSI

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

77.9

0.69

78.3

31.3

Major PPT

85.2

0.79

0.9

90.8

21.8

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

0.39

1.9

80.79

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043468

16283074 - 16301658

18585

ENSAPLT00000008372

16282819 - 16300658

17840