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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16294900_16297145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16294900 - 16297145

Intron Length:

2246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCAATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TCCTTCTCAATT

Flanking Amino Acid:

RLTTVHDVYKVETIGDAYMV

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

68.7

0.42

1.1

68.3

35.4

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

63.6

0.5

1.5

75.15

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043468

16283074 - 16301658

18585

ENSAPLT00000008372

16282819 - 16300658

17840