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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16297293_16297574_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16297293 - 16297574

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

GTCTTTGTAAAG

Flanking Amino Acid:

ENPVSGNPIQIRVGIHTGPV

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

0.43

1.1

70.4

39.2

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

45.9

-0.4

2.1

52.19

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043468

16283074 - 16301658

18585

ENSAPLT00000008372

16282819 - 16300658

17840