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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16299470_16299557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16299470 - 16299557

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGCCA

5'SS Class:

major

3'SS Sequence:

GTTCTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

ACTCACTTAAAT

Flanking Amino Acid:

TETTPSSHQTVNQTQQERDQ

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

56.5

42.4

Major BPS

0.5

1.1

76.9

32.8

Major PPT

89.9

0.9

0.7

88.2

29.1

Minor 5ss

-2.4

3.5

39.1

46.2

Minor BPS

60.4

0.4

1.6

74.66

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043468

16283074 - 16301658

18585

ENSAPLT00000008372

16282819 - 16300658

17840