Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_16353063_16355773_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16353063 - 16355773

Intron Length:

2711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGTTT

5'SS Class:

major

3'SS Sequence:

TTGTGATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATGTAAACT

Flanking Amino Acid:

ISMFGTGDSKTLHQFKFDFL

Intron Amino Acid Position:

1085

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

74.5

36.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.7

0.9

77.7

40.6

Minor 5ss

48.1

-0.2

3.2

72.7

44.5

Minor BPS

-0

2.3

72.89

43.9

Associated Gene:

Gene:

DOCK10

Ensembl Gene ID:

ENSAPLG00000006337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027098

16321415 - 16446165

124751

ENSAPLT00000042762

16321467 - 16468268

146802

ENSAPLT00000006735

16321415 - 16463588

142174

ENSAPLT00000037117

16321467 - 16426444

104978

ENSAPLT00000031607

16321467 - 16446165

124699

ENSAPLT00000031061

16321415 - 16446165

124751

ENSAPLT00000043637

16321467 - 16446165

124699