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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16359631_16362573_R


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
16359631 - 16362573

Intron Length:
2943

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTATGACTG

5'SS Class:
major

3'SS Sequence:
TTTTCTCCTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TTGATTTTATTT

Flanking Amino Acid:
LDNCINSYVTYVFRTKSFEE

Intron Amino Acid Position:
946

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.5
0.53
1.1
59.4
45.1

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
91.1
0.92
0.6
89.5
19.1

Minor 5ss
42.1
-0.9
3.1
57.4
46.7

Minor BPS
55
0.23
1.6
71.47
40.5

Associated Gene:

Gene:
DOCK10

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16321415 - 16446165
124751

16321467 - 16446165
124699

16321415 - 16446165
124751

16321467 - 16468268
146802

16321415 - 16463588
142174

16321467 - 16426444
104978

16321467 - 16446165
124699