Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_16371087_16371777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16371087 - 16371777

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTTATCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTACTTTTATCA

Flanking Amino Acid:

SDEEGAKPLKCIYGKPGGPL

Intron Amino Acid Position:

710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

38.4

Major BPS

73.8

0.59

0.9

26.8

Major PPT

81.4

0.71

0.9

81.8

34.3

Minor 5ss

34.1

-1.8

3.2

46.7

48.6

Minor BPS

58.5

0.26

1.6

69.08

37.2

Associated Gene:

Gene:

DOCK10

Ensembl Gene ID:

ENSAPLG00000006337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031607

16321467 - 16446165

124699

ENSAPLT00000031061

16321415 - 16446165

124751

ENSAPLT00000043637

16321467 - 16446165

124699

ENSAPLT00000006735

16321415 - 16463588

142174

ENSAPLT00000042762

16321467 - 16468268

146802

ENSAPLT00000037117

16321467 - 16426444

104978