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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16415486_16446000_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
16415486 - 16446000

Intron Length:
30515

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTACGGTAT

5'SS Class:
major

3'SS Sequence:
TTTTTCTCTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ACCTGAT

U12 Branch Point Sequence:
ATTACCTGATCT

Flanking Amino Acid:
MSRPRTLIIMQEKPKLLEPL

Intron Amino Acid Position:
56

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.2
0.57
1.1
68.5
38.7

Major BPS
70
0.5
1
59.3
39.1

Major PPT
93.1
0.97
0.6
88.4
21.4

Minor 5ss
37.5
-1.4
3.6
51.8
47.2

Minor BPS
60.6
0.41
1.8
80.64
40.5

Associated Gene:

Gene:
DOCK10

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16321467 - 16446165
124699

16321415 - 16446165
124751

16321415 - 16446165
124751

16321467 - 16446165
124699