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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1647866_1690203_R

Intron Information:

Intron Rank:

134294

Intron Class:

major

Intron Phase:

Intron Coordinates:

1647866 - 1690203

Intron Length:

42338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGTTTTTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

0.62

1.4

85.7

34.9

Major PPT

84.2

0.77

0.8

78.2

34.9

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

49.4

0.04

1.9

72.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048010

1646675 - 1709983

63309

ENSAPLT00000027199

1646675 - 1704945

58271