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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16585899_16592864_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

16585899 - 16592864

Intron Length:

6966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGTACG

5'SS Class:

major

3'SS Sequence:

TTTCAACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGTTTTTCAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

68.2

42.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.63

0.9

34.5

Minor 5ss

35.1

-1.7

2.8

40.1

40.7

Minor BPS

66.4

0.5

1.5

74.9

35.5

Associated Gene:

Gene:

NYAP2

Ensembl Gene ID:

ENSAPLG00000008664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009012

16584319 - 16723299

138981

ENSAPLT00000009006

16585037 - 16723299

138263