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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16593108_16645023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16593108 - 16645023

Intron Length:

51916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

KRRKQEEAIKRIGGEVVRGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

84.5

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

41.5

-0.9

60.7

43.8

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

NYAP2

Ensembl Gene ID:

ENSAPLG00000008664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009012

16584319 - 16723299

138981

ENSAPLT00000009006

16585037 - 16723299

138263