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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16645323_16667726_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16645323 - 16667726

Intron Length:

22404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACACT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTCTGATGAATT

Flanking Amino Acid:

KSGKLPDRTEVSAKPRPHSD

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

77.8

36.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

89.9

0.9

0.7

88.2

29.1

Minor 5ss

41.4

-1

58.6

45.7

Minor BPS

49.2

0.02

2.1

73.82

43.2

Associated Gene:

Gene:

NYAP2

Ensembl Gene ID:

ENSAPLG00000008664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009012

16584319 - 16723299

138981

ENSAPLT00000009006

16585037 - 16723299

138263