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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16668825_16688146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16668825 - 16688146

Intron Length:

19322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTGTATTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

CTATAATGAAAT

Flanking Amino Acid:

SGRRSKEPAEKPLDELKIRS

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

75.5

0.63

1.1

34.4

Major PPT

75.2

0.57

0.9

69.8

41.2

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

46.2

-0.2

65.91

43.5

Associated Gene:

Gene:

NYAP2

Ensembl Gene ID:

ENSAPLG00000008664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009012

16584319 - 16723299

138981

ENSAPLT00000009006

16585037 - 16723299

138263