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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16688360_16696684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16688360 - 16696684

Intron Length:

8325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TCCAATTCACTG

Flanking Amino Acid:

PTMLAGSNSSEPKASCRLGR

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

86.7

0.83

0.7

31.9

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

38.3

-1

1.8

36.38

40.1

Associated Gene:

Gene:

NYAP2

Ensembl Gene ID:

ENSAPLG00000008664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009012

16584319 - 16723299

138981

ENSAPLT00000009006

16585037 - 16723299

138263