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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16734996_16736733_F

Intron Information:

Intron Rank:

124739

Intron Class:

major

Intron Phase:

Intron Coordinates:

16734996 - 16736733

Intron Length:

1738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTGTGTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.4

41.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

82.1

0.72

0.9

78.9

38.5

Minor 5ss

55.9

0.2

2.5

73.6

Minor BPS

0.64

1.7

83.09

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035592

16734145 - 16737285

3141

ENSAPLT00000028957

16734145 - 16737665

3521