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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1690372_1709932_R

Intron Information:

Intron Rank:

134291

Intron Class:

major

Intron Phase:

Intron Coordinates:

1690372 - 1709932

Intron Length:

19561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTACC

5'SS Class:

major

3'SS Sequence:

CTTTCCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTCCACTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

73.4

35.4

Major BPS

78.2

0.7

77.9

32.1

Major PPT

0.79

0.7

80.2

25.2

Minor 5ss

43.2

-0.8

2.4

55.7

41.5

Minor BPS

66.5

0.5

1.5

72.87

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019537

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026664

1655132 - 1709983

54852

ENSAPLT00000048010

1646675 - 1709983

63309

ENSAPLT00000023173

1682486 - 1709983

27498

ENSAPLT00000046224

1686380 - 1709983

23604

ENSAPLT00000041191

1669497 - 1709983

40487

ENSAPLT00000039920

1676008 - 1709983

33976