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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16947038_16978162_R

Intron Information:

Intron Rank:

148176

Intron Class:

major

Intron Phase:

Intron Coordinates:

16947038 - 16978162

Intron Length:

31125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTTCA

5'SS Class:

major

3'SS Sequence:

TTCCTTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTAAAT

U12 Branch Point Sequence:

AATTCAGTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

70.7

35.9

Major BPS

0.27

1.1

67.3

35.2

Major PPT

81.4

0.71

0.9

79.1

32.9

Minor 5ss

39.5

-1.2

2.9

51.3

45.1

Minor BPS

54.2

0.11

2.2

71.55

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027040

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023503

16947018 - 16978524

31507