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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16947038_16985774_R

Intron Information:

Intron Rank:

148178

Intron Class:

major

Intron Phase:

Intron Coordinates:

16947038 - 16985774

Intron Length:

38737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTAAAT

U12 Branch Point Sequence:

AATTCAGTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

93.7

19.8

Major BPS

0.27

1.1

67.3

35.2

Major PPT

81.4

0.71

0.9

79.1

32.9

Minor 5ss

43.4

-0.7

2.9

60.8

37.6

Minor BPS

54.2

0.11

2.2

71.55

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027040

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030923

16945270 - 16985945

40676