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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16978352_17004743_R

Intron Information:

Intron Rank:

148177

Intron Class:

major

Intron Phase:

Intron Coordinates:

16978352 - 17004743

Intron Length:

26392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTAATTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATTTTCTGATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.2

0.61

0.9

69.9

39.4

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

56.4

0.18

1.7

69.18

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027040

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030517

16977758 - 17004810

27053