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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17031470_17031545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17031470 - 17031545

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGGTGTTCATCT

Flanking Amino Acid:

AYSKVCLYLTSCVSYVPEPE

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

65.4

0.35

63.2

31.9

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

45.2

-0.2

2.1

64.49

Associated Gene:

Gene:

PSMD2

Ensembl Gene ID:

ENSAPLG00000008557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008899

17030668 - 17036151

5484