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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17031705_17031954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17031705 - 17031954

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGCGGA

5'SS Class:

major

3'SS Sequence:

CCCCTCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCAAA

U12 Branch Point Sequence:

GCGCCTGCAAAG

Flanking Amino Acid:

VEDIFTSCKDVVVQKQMAFM

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.2

56.3

43.1

Major BPS

46.1

-0.2

1.3

52.1

40.2

Major PPT

70.3

0.46

0.9

64.3

Minor 5ss

37.7

-1.4

3.4

47.2

48.2

Minor BPS

-1.1

34.73

39.8

Associated Gene:

Gene:

PSMD2

Ensembl Gene ID:

ENSAPLG00000008557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008899

17030668 - 17036151

5484