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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17033622_17033904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17033622 - 17033904

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

TCCTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CCTCCCTGAGCG

Flanking Amino Acid:

VMGDSKSSMEVAGVTALACG

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

38.8

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

81.4

0.71

0.7

73.1

31.8

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

48.5

-0.2

1.8

53.75

46.7

Associated Gene:

Gene:

PSMD2

Ensembl Gene ID:

ENSAPLG00000008557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008899

17030668 - 17036151

5484