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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17034068_17034162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17034068 - 17034162

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGAG

5'SS Class:

major

3'SS Sequence:

CACTGCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCACCCCACACT

Flanking Amino Acid:

LPLGLGLNHLGKGEAIEAIL

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

63.9

42.4

Major BPS

72.7

0.56

30.1

Major PPT

65.5

0.35

0.9

57.2

33.1

Minor 5ss

28.1

-2.5

3.4

43.5

Minor BPS

43.1

-0.4

2.3

62.86

46.7

Associated Gene:

Gene:

PSMD2

Ensembl Gene ID:

ENSAPLG00000008557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008899

17030668 - 17036151

5484