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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17035268_17035400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17035268 - 17035400

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGGCC

5'SS Class:

major

3'SS Sequence:

TTGCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

GCATACTTAAGT

Flanking Amino Acid:

NNLFMVRLAQGLTHLGKGTL

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

63.1

37.4

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

71.5

0.48

0.8

62.4

34.6

Minor 5ss

25.1

-2.9

3.3

33.3

42.1

Minor BPS

56.8

0.29

1.9

70.67

45.6

Associated Gene:

Gene:

PSMD2

Ensembl Gene ID:

ENSAPLG00000008557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008899

17030668 - 17036151

5484