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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17058213_17058311_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17058213 - 17058311

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAACTGCT

5'SS Class:

major

3'SS Sequence:

GGCGGCGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGGTGCTGACGC

Flanking Amino Acid:

IAALARSSLHGISQVVKEHV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

70.1

40.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

51.9

0.04

42.2

38.5

Minor 5ss

41.4

-1

3.2

59.9

44.5

Minor BPS

41.1

-0.7

2.2

51.46

45.5

Associated Gene:

Gene:

FAM131A

Ensembl Gene ID:

ENSAPLG00000008967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009320

17058143 - 17059501

1359