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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17064723_17064802_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17064723 - 17064802

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GGGGTGCCCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

CTCTACTCACCC

Flanking Amino Acid:

RLVGMVSLKELRKAIEGSLT

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

55.9

0.13

46.8

41.5

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

-0.2

59.2

45.7

Associated Gene:

Gene:

CLCN2

Ensembl Gene ID:

ENSAPLG00000008974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045912

17064528 - 17075324

10797

ENSAPLT00000009375

17064528 - 17075324

10797