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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17065079_17065204_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17065079 - 17065204

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCACCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

GTCCCCCCACCC

Flanking Amino Acid:

DAGDRMTPAEILAWEERQLD

Intron Amino Acid Position:

938

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

63.9

0.31

0.8

53.9

29.3

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

42.8

-0.5

54.01

43.4

Associated Gene:

Gene:

CLCN2

Ensembl Gene ID:

ENSAPLG00000008974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045912

17064528 - 17075324

10797

ENSAPLT00000009375

17064528 - 17075324

10797