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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17065244_17065925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17065244 - 17065925

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

ACCTCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

TCACCCCCACCT

Flanking Amino Acid:

CANTAAEPAEEDMDAGDRMT

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.9

35.3

Major BPS

64.9

0.37

29.8

Major PPT

71.6

0.49

0.8

64.8

30.1

Minor 5ss

33.5

-1.9

3.4

47.6

Minor BPS

44.4

-0.3

2.1

63.61

45.9

Associated Gene:

Gene:

CLCN2

Ensembl Gene ID:

ENSAPLG00000008974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045912

17064528 - 17075324

10797