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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17065643_17065925_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17065643 - 17065925

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

CGCGTGGTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

GCCCCCCTAACG

Flanking Amino Acid:

CANTAAEPAEAQGTAPRKAK

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.9

35.3

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

54.2

0.1

1.1

45.1

45.8

Minor 5ss

33.5

-1.9

3.4

47.6

Minor BPS

50.9

-0.1

1.8

54.45

Associated Gene:

Gene:

CLCN2

Ensembl Gene ID:

ENSAPLG00000008974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009375

17064528 - 17075324

10797