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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17066178_17066261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17066178 - 17066261

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

ATCCCCTGACCC

Flanking Amino Acid:

RLSEASVCFQINTEASSFAP

Intron Amino Acid Position:

848

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

88.7

0.87

0.6

84.2

23.8

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

51.4

0.02

1.8

63.28

41.9

Associated Gene:

Gene:

CLCN2

Ensembl Gene ID:

ENSAPLG00000008974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045912

17064528 - 17075324

10797

ENSAPLT00000009375

17064528 - 17075324

10797