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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17066974_17067165_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17066974 - 17067165

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CGCGCGGGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGGGAC

U12 Branch Point Sequence:

CTCCCGGGGACG

Flanking Amino Acid:

RIVPGGYAVVGAAALSGAVT

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.7

41.3

Major BPS

37.7

-0.7

1.3

23.9

34.6

Major PPT

49.6

-0

1.1

40.9

38.2

Minor 5ss

40.2

-1.1

2.8

45.4

42.5

Minor BPS

-1.3

2.5

40.23

Associated Gene:

Gene:

CLCN2

Ensembl Gene ID:

ENSAPLG00000008974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045912

17064528 - 17075324

10797

ENSAPLT00000009375

17064528 - 17075324

10797