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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17068139_17068243_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17068139 - 17068243

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

GCCACCCCGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTGCAC

U12 Branch Point Sequence:

TCCTGTGCCACC

Flanking Amino Acid:

QKTINRFLMKKRLLFPALVT

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.1

34.2

Major BPS

-0.3

1.5

44.3

Major PPT

55.9

0.13

46.6

36.6

Minor 5ss

34.3

-1.8

3.4

44.2

37.7

Minor BPS

34.6

-1.2

2.5

45.01

44.2

Associated Gene:

Gene:

CLCN2

Ensembl Gene ID:

ENSAPLG00000008974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009375

17064528 - 17075324

10797

ENSAPLT00000045912

17064528 - 17075324

10797