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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17070799_17074733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17070799 - 17074733

Intron Length:

3935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGCA

5'SS Class:

major

3'SS Sequence:

CTCTTCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

CTCCCCAAAACT

Flanking Amino Acid:

QRALQYEQTLMYGRYTQDLG

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

63.8

36.3

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

77.5

0.62

0.7

69.4

31.3

Minor 5ss

31.3

-2.1

3.2

35.6

42.2

Minor BPS

49.4

0.03

70.15

46.4

Associated Gene:

Gene:

CLCN2

Ensembl Gene ID:

ENSAPLG00000008974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045912

17064528 - 17075324

10797

ENSAPLT00000009375

17064528 - 17075324

10797