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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17078368_17078536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17078368 - 17078536

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTCCC

5'SS Class:

major

3'SS Sequence:

TCCTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCAAC

U12 Branch Point Sequence:

TCGGTGCCAACC

Flanking Amino Acid:

AHPRGEMRGWVHIPNRCQAG

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

62.1

40.8

Major BPS

48.7

-0

1.3

56.4

38.8

Major PPT

0.47

0.8

61.6

Minor 5ss

33.7

-1.9

3.1

36.9

40.3

Minor BPS

37.2

-0.9

2.3

46.07

43.2

Associated Gene:

Gene:

CHRD

Ensembl Gene ID:

ENSAPLG00000031090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045207

17076711 - 17084890

8180