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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17078651_17078742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17078651 - 17078742

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

CTGGCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CAGCCCTCACCT

Flanking Amino Acid:

RLLKGFYGTEAQGVVKDLDA

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

65.7

0.35

0.9

58.2

33.1

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

48.1

-0

1.9

62.89

46.7

Associated Gene:

Gene:

CHRD

Ensembl Gene ID:

ENSAPLG00000031090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045207

17076711 - 17084890

8180