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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17079634_17079729_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17079634 - 17079729

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGCACG

5'SS Class:

major

3'SS Sequence:

CCCCGGGTTCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CCCGGGTTCAAG

Flanking Amino Acid:

GTITARRGCDTIQSVLCGAD

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.1

56.4

42.6

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

51.9

0.04

1.1

46.7

39.5

Minor 5ss

36.4

-1.5

2.9

46.8

42.3

Minor BPS

29.9

-1.7

2.4

26.73

42.6

Associated Gene:

Gene:

CHRD

Ensembl Gene ID:

ENSAPLG00000031090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045207

17076711 - 17084890

8180