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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17079878_17079966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17079878 - 17079966

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

TCCTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACACAC

U12 Branch Point Sequence:

TGCGCCTCCACC

Flanking Amino Acid:

REVRANITVEDPDFAEVLSE

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

58.1

46.4

Major BPS

49.1

-0

0.9

56.3

29.4

Major PPT

81.4

0.71

0.7

73.1

31.8

Minor 5ss

-2.3

3.4

39.4

Minor BPS

47.4

-0.2

2.1

59.01

45.8

Associated Gene:

Gene:

CHRD

Ensembl Gene ID:

ENSAPLG00000031090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045207

17076711 - 17084890

8180