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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17080803_17080908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17080803 - 17080908

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAGGG

5'SS Class:

major

3'SS Sequence:

TATTCGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TGACCCCTAACT

Flanking Amino Acid:

QKSAAPEDGMLCGMWRTVSK

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

58.6

40.6

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

0.52

0.9

66.3

35.3

Minor 5ss

24.5

-2.9

3.1

26.1

Minor BPS

65.1

0.55

1.7

80.76

39.9

Associated Gene:

Gene:

CHRD

Ensembl Gene ID:

ENSAPLG00000031090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045207

17076711 - 17084890

8180