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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17081006_17081765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17081006 - 17081765

Intron Length:

760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCGGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCTGCTCACCC

Flanking Amino Acid:

SYLLFSISYERLGRPSRVRF

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

65.1

0.34

57.9

38.5

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

45.4

-0.3

2.2

57.93

47.1

Associated Gene:

Gene:

CHRD

Ensembl Gene ID:

ENSAPLG00000031090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045207

17076711 - 17084890

8180