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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17083843_17084644_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17083843 - 17084644

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGCGTGTT

5'SS Class:

major

3'SS Sequence:

TTTGTTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

TTTGTTTGCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

72.4

39.2

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

79.7

0.67

0.9

75.8

38.1

Minor 5ss

31.7

-2.1

3.5

Minor BPS

48.2

-0.1

40.1

Associated Gene:

Gene:

CHRD

Ensembl Gene ID:

ENSAPLG00000031090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045207

17076711 - 17084890

8180