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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17090483_17091307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17090483 - 17091307

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CCTTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

TGCCCACCAGCT

Flanking Amino Acid:

PKPPGEHGAEQAAPPHVLPP

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

59.9

39.3

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

77.4

0.62

0.7

69.1

31.5

Minor 5ss

29.8

-2.3

3.1

38.2

40.5

Minor BPS

-0.7

2.1

57.16

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036450

17087035 - 17092509

5475

ENSAPLT00000035926

17090034 - 17092509

2476