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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17091678_17091830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17091678 - 17091830

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

GCCTGCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTCAG

U12 Branch Point Sequence:

CCCTCCCTGCCT

Flanking Amino Acid:

VPVGLEKDPRNQSKRREILC

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

71.6

40.2

Major BPS

41.3

-0.5

1.7

42.8

49.4

Major PPT

67.2

0.39

0.9

57.3

38.7

Minor 5ss

39.2

-1.2

2.8

41.9

44.5

Minor BPS

39.4

-0.7

3.6

63.31

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036450

17087035 - 17092509

5475