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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17091990_17092071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17091990 - 17092071

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TGTTTGTGACCC

Flanking Amino Acid:

AFLMLLKTWEPPQEEPWEPG

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

79.4

0.66

0.8

69.8

36.6

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

45.6

-0.3

2.3

63.34

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036450

17087035 - 17092509

5475

ENSAPLT00000035926

17090034 - 17092509

2476