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Intron Name: Anas_platyrhynchos_platyrhynchos_9_172133_172248_F

Intron Information:

Intron Rank:

125611

Intron Class:

major

Intron Phase:

Intron Coordinates:

172133 - 172248

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCAG

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TGATCCACTACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

62.4

43.6

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

0.9

0.7

88.2

29.1

Minor 5ss

30.2

-2.3

3.2

38.2

46.7

Minor BPS

46.8

-0.2

2.1

62.24

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048442

146033 - 174378

28346

ENSAPLT00000045842

147801 - 174378

26578

ENSAPLT00000027408

147801 - 201828

54028

ENSAPLT00000023370

147801 - 174378

26578