Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_17328146_17328969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17328146 - 17328969

Intron Length:

824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TATGCTTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTCTCACTATTT

Flanking Amino Acid:

ACQLLPEDQSNFGFCRAAMV

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

0.87

0.8

85.6

Major PPT

72.3

0.5

1.1

65.6

45.1

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

48.2

-0

2.1

73.75

43.2

Associated Gene:

Gene:

AHSG

Ensembl Gene ID:

ENSAPLG00000006249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006482

17323920 - 17330384

6465