Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_17341719_17342637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17341719 - 17342637

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTATTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATTAACA

Flanking Amino Acid:

VLNVTRASMQWVIGPAYFVE

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

74.1

38.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.7

0.9

77.5

34.5

Minor 5ss

37.2

-1.4

48.3

Minor BPS

71.4

0.67

1.5

80.01

35.9

Associated Gene:

Gene:

FETUB

Ensembl Gene ID:

ENSAPLG00000006369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006605

17335160 - 17344671

9512