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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17362441_17364107_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
17362441 - 17364107

Intron Length:
1667

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCTGTACA

5'SS Class:
major

3'SS Sequence:
ATATCTGTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTACAT

U12 Branch Point Sequence:
ATCTCCTAAATA

Flanking Amino Acid:
LVEIKEAKRQVVAGWNYVIK

Intron Amino Acid Position:
189

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.3
73.3
37.4

Major BPS
82.7
0.81
0.9
89.3
26.1

Major PPT
75.3
0.57
1
66.1
44.5

Minor 5ss
37.5
-1.4
2.4
44
43.2

Minor BPS
66.7
0.52
1.6
73.28
39.2

Associated Gene:

Gene:
KNG1

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17356233 - 17370798
14566