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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17390732_17390927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17390732 - 17390927

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CTTTTTTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ACTTCATGAACT

Flanking Amino Acid:

VFDMLNRRYLSPKWIKMFVL

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

76.5

38.6

Major BPS

82.2

0.8

71.9

35.8

Major PPT

87.6

0.85

0.6

88.2

21.6

Minor 5ss

41.9

-0.9

2.8

57.5

Minor BPS

64.2

0.52

1.7

80.91

40.2

Associated Gene:

Gene:

EIF4A2

Ensembl Gene ID:

ENSAPLG00000006751

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026892

17388145 - 17393450

5306

ENSAPLT00000007048

17388145 - 17394810

6666