Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_17391930_17392219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17391930 - 17392219

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTAACTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTTTTTAACT

Flanking Amino Acid:

HARDFTVSALHGDMDQKERD

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.9

32.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.5

0.69

0.9

73.4

36.7

Minor 5ss

36.3

-1.6

41.5

Minor BPS

1.08

90.89

33.1

Associated Gene:

Gene:

EIF4A2

Ensembl Gene ID:

ENSAPLG00000006751

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026892

17388145 - 17393450

5306

ENSAPLT00000007048

17388145 - 17394810

6666